MEGA X : Molecular Evolutionary Genetics Analysis across Computing Platforms
Open access full text
Check availability:
Full text (publisher site)
Abstract
The Molecular Evolutionary Genetics Analysis (Mega) software implements many analytical methods and tools for phylogenomics and phylomedicine. Here, we report a transformation of Mega to enable cross-platform use on Microsoft Windows and Linux operating systems. Mega X does not require virtualization or emulation software and provides a uniform user experience across platforms. Mega X has additionally been upgraded to use multiple computing cores for many molecular evolutionary analyses. Mega X is available in two interfaces (graphical and command line) and can be downloaded from www.megasoftware.net free of charge.
Saved in:
| Authors: | ; ; ; ; |
|---|---|
| Published in: | Molecular Biology and Evolution, vol. 35, no. 6, pp. 1547-1549 |
| Publication date: | 01/05/2018 |
| Publisher: | Oxford University Press |
| Document type: | Article |
| Language: | English |
| DOI: | 10.1093/molbev/msy096 |
| ISSN: | 0737-4038, 1537-1719 |
| Open access: | Open access Bronze: free to read at the publisher, without an open license – Molecular Biology and Evolution |
| Cited by: | 37,617 |
| Subjects: |
Genomics and Phylogenetic Studies
(Life Sciences > Biochemistry, Genetics and Molecular Biology > Molecular Biology)
Genetics, Bioinformatics, and Biomedical Research
(Life Sciences > Biochemistry, Genetics and Molecular Biology > Molecular Biology)
Genetic diversity and population structure
(Life Sciences > Biochemistry, Genetics and Molecular Biology > Genetics)
|
| Identifiers: | OpenAlex W2799524357 · PMID 29722887 |
Central index data: OpenAlex (CC0 license).
Full central index record (JSON) from api.openalex.org/works/W2799524357
{
"abstract (reconstructed from abstract_inverted_index)": "The Molecular Evolutionary Genetics Analysis (Mega) software implements many analytical methods and tools for phylogenomics and phylomedicine. Here, we report a transformation of Mega to enable cross-platform use on Microsoft Windows and Linux operating systems. Mega X does not require virtualization or emulation software and provides a uniform user experience across platforms. Mega X has additionally been upgraded to use multiple computing cores for many molecular evolutionary analyses. Mega X is available in two interfaces (graphical and command line) and can be downloaded from www.megasoftware.net free of charge.",
"id": "https://openalex.org/W2799524357",
"doi": "https://doi.org/10.1093/molbev/msy096",
"title": "MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms",
"display_name": "MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms",
"publication_year": 2018,
"publication_date": "2018-05-01",
"ids": {
"openalex": "https://openalex.org/W2799524357",
"doi": "https://doi.org/10.1093/molbev/msy096",
"mag": "2799524357",
"pmid": "https://pubmed.ncbi.nlm.nih.gov/29722887"
},
"language": "en",
"primary_location": {
"id": "doi:10.1093/molbev/msy096",
"doi": "https://doi.org/10.1093/molbev/msy096",
"is_oa": true,
"landing_page_url": "https://doi.org/10.1093/molbev/msy096",
"pdf_url": "https://academic.oup.com/mbe/article-pdf/35/6/1547/25091958/msy096.pdf",
"source": {
"id": "https://openalex.org/S57552105",
"display_name": "Molecular Biology and Evolution",
"issn_l": "0737-4038",
"issn": [
"0737-4038",
"1537-1719"
],
"is_oa": false,
"is_in_doaj": true,
"is_core": true,
"listed_in": [
"anvur-scientific",
"cwts-core",
"doaj",
"dongbi-a",
"jufo-3",
"ki-jl-2",
"medline",
"norway-2",
"poland-200",
"russia-white-list-1"
],
"host_organization": "https://openalex.org/P4310311648",
"host_organization_name": "Oxford University Press",
"host_organization_lineage": [
"https://openalex.org/P4310311648",
"https://openalex.org/P4310311647"
],
"host_organization_lineage_names": [
"Oxford University Press",
"University of Oxford"
],
"type": "journal"
},
"license": null,
"license_id": null,
"version": "publishedVersion",
"is_accepted": true,
"is_published": true,
"raw_source_name": "Molecular Biology and Evolution",
"raw_type": "journal-article"
},
"volume": null,
"type": "article",
"indexed_in": [
"crossref",
"doaj",
"pubmed"
],
"open_access": {
"is_oa": true,
"oa_status": "bronze",
"oa_url": "https://academic.oup.com/mbe/article-pdf/35/6/1547/25091958/msy096.pdf",
"any_repository_has_fulltext": true
},
"authorships": [
{
"author_position": "first",
"author": {
"id": "https://openalex.org/A5100680948",
"display_name": "Sudhir Kumar",
"orcid": "https://orcid.org/0000-0002-9918-8212",
"observed_orcids": [
"https://orcid.org/0000-0002-9918-8212",
"https://orcid.org/0000-0001-9673-5842"
]
},
"institutions": [
{
"id": "https://openalex.org/I185163786",
"display_name": "King Abdulaziz University",
"ror": "https://ror.org/02ma4wv74",
"country_code": "SA",
"type": "education",
"lineage": [
"https://openalex.org/I185163786"
]
},
{
"id": "https://openalex.org/I84392919",
"display_name": "Temple University",
"ror": "https://ror.org/00kx1jb78",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I84392919"
]
}
],
"countries": [
"SA",
"US"
],
"is_corresponding": false,
"raw_author_name": "Sudhir Kumar",
"raw_affiliation_strings": [
"Center for Excellence in Genome Medicine and Research, King Abdulaziz University, Jeddah, Saudi Arabia",
"Department of Biology, Temple University, Philadelphia, PA",
"Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA"
],
"raw_orcid": null,
"affiliations": [
{
"raw_affiliation_string": "Center for Excellence in Genome Medicine and Research, King Abdulaziz University, Jeddah, Saudi Arabia",
"institution_ids": [
"https://openalex.org/I185163786"
]
},
{
"raw_affiliation_string": "Department of Biology, Temple University, Philadelphia, PA",
"institution_ids": [
"https://openalex.org/I84392919"
]
},
{
"raw_affiliation_string": "Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA",
"institution_ids": [
"https://openalex.org/I84392919"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5067791761",
"display_name": "Glen Stecher",
"orcid": "https://orcid.org/0009-0008-2331-3735",
"observed_orcids": [
"https://orcid.org/0009-0008-2331-3735"
]
},
"institutions": [
{
"id": "https://openalex.org/I84392919",
"display_name": "Temple University",
"ror": "https://ror.org/00kx1jb78",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I84392919"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Glen Stecher",
"raw_affiliation_strings": [
"Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA"
],
"raw_orcid": null,
"affiliations": [
{
"raw_affiliation_string": "Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA",
"institution_ids": [
"https://openalex.org/I84392919"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": null,
"display_name": "Michael Li",
"orcid": null,
"observed_orcids": []
},
"institutions": [
{
"id": "https://openalex.org/I84392919",
"display_name": "Temple University",
"ror": "https://ror.org/00kx1jb78",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I84392919"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Michael Li",
"raw_affiliation_strings": [
"Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA"
],
"raw_orcid": null,
"affiliations": [
{
"raw_affiliation_string": "Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA",
"institution_ids": [
"https://openalex.org/I84392919"
]
}
]
},
{
"author_position": "middle",
"author": {
"id": "https://openalex.org/A5041551178",
"display_name": "Christina Knyaz",
"orcid": null,
"observed_orcids": []
},
"institutions": [
{
"id": "https://openalex.org/I84392919",
"display_name": "Temple University",
"ror": "https://ror.org/00kx1jb78",
"country_code": "US",
"type": "education",
"lineage": [
"https://openalex.org/I84392919"
]
}
],
"countries": [
"US"
],
"is_corresponding": false,
"raw_author_name": "Christina Knyaz",
"raw_affiliation_strings": [
"Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA"
],
"raw_orcid": null,
"affiliations": [
{
"raw_affiliation_string": "Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA",
"institution_ids": [
"https://openalex.org/I84392919"
]
}
]
},
{
"author_position": "last",
"author": {
"id": "https://openalex.org/A5007823743",
"display_name": "Koichiro Tamura",
"orcid": "https://orcid.org/0000-0001-7189-5399",
"observed_orcids": [
"https://orcid.org/0000-0001-7189-5399"
]
},
"institutions": [
{
"id": "https://openalex.org/I69740276",
"display_name": "Tokyo Metropolitan University",
"ror": "https://ror.org/00ws30h19",
"country_code": "JP",
"type": "education",
"lineage": [
"https://openalex.org/I69740276"
]
}
],
"countries": [
"JP"
],
"is_corresponding": true,
"raw_author_name": "Koichiro Tamura",
"raw_affiliation_strings": [
"Department of Biological Sciences, Tokyo Metropolitan University, Hachioji, Japan",
"Research Center for Genomics and Bioinformatics, Tokyo Metropolitan University, Hachioji, Japan"
],
"raw_orcid": null,
"affiliations": [
{
"raw_affiliation_string": "Department of Biological Sciences, Tokyo Metropolitan University, Hachioji, Japan",
"institution_ids": [
"https://openalex.org/I69740276"
]
},
{
"raw_affiliation_string": "Research Center for Genomics and Bioinformatics, Tokyo Metropolitan University, Hachioji, Japan",
"institution_ids": [
"https://openalex.org/I69740276"
]
}
]
}
],
"institutions": [],
"countries_distinct_count": 3,
"institutions_distinct_count": 3,
"corresponding_author_ids": [
"https://openalex.org/A5007823743"
],
"corresponding_institution_ids": [
"https://openalex.org/I69740276"
],
"apc_list": {
"value": 3418,
"currency": "USD",
"value_usd": 3418
},
"apc_paid": null,
"fwci": 1065.7725,
"has_fulltext": true,
"cited_by_count": 37617,
"citation_normalized_percentile": {
"value": 1,
"is_in_top_1_percent": true,
"is_in_top_10_percent": true
},
"cited_by_percentile_year": {
"min": 89,
"max": 100
},
"biblio": {
"volume": "35",
"issue": "6",
"first_page": "1547",
"last_page": "1549"
},
"is_retracted": false,
"is_paratext": false,
"is_xpac": false,
"primary_topic": {
"id": "https://openalex.org/T10015",
"display_name": "Genomics and Phylogenetic Studies",
"score": 0.9955999851226807,
"subfield": {
"id": "https://openalex.org/subfields/1312",
"display_name": "Molecular Biology"
},
"field": {
"id": "https://openalex.org/fields/13",
"display_name": "Biochemistry, Genetics and Molecular Biology"
},
"domain": {
"id": "https://openalex.org/domains/1",
"display_name": "Life Sciences"
}
},
"topics": [
{
"id": "https://openalex.org/T10015",
"display_name": "Genomics and Phylogenetic Studies",
"score": 0.9955999851226807,
"subfield": {
"id": "https://openalex.org/subfields/1312",
"display_name": "Molecular Biology"
},
"field": {
"id": "https://openalex.org/fields/13",
"display_name": "Biochemistry, Genetics and Molecular Biology"
},
"domain": {
"id": "https://openalex.org/domains/1",
"display_name": "Life Sciences"
}
},
{
"id": "https://openalex.org/T13937",
"display_name": "Genetics, Bioinformatics, and Biomedical Research",
"score": 0.002400000113993883,
"subfield": {
"id": "https://openalex.org/subfields/1312",
"display_name": "Molecular Biology"
},
"field": {
"id": "https://openalex.org/fields/13",
"display_name": "Biochemistry, Genetics and Molecular Biology"
},
"domain": {
"id": "https://openalex.org/domains/1",
"display_name": "Life Sciences"
}
},
{
"id": "https://openalex.org/T10012",
"display_name": "Genetic diversity and population structure",
"score": 0.00039999998989515007,
"subfield": {
"id": "https://openalex.org/subfields/1311",
"display_name": "Genetics"
},
"field": {
"id": "https://openalex.org/fields/13",
"display_name": "Biochemistry, Genetics and Molecular Biology"
},
"domain": {
"id": "https://openalex.org/domains/1",
"display_name": "Life Sciences"
}
}
],
"keywords": [
{
"id": "https://openalex.org/keywords/phylogenomics",
"display_name": "phylogenomics",
"score": 0.7680000066757202
},
{
"id": "https://openalex.org/keywords/cross-platform-software",
"display_name": "cross-platform software",
"score": 0.8410000205039978
},
{
"id": "https://openalex.org/keywords/multicore-computing",
"display_name": "multi-core computing",
"score": 0.6869999766349792
},
{
"id": "https://openalex.org/keywords/phylogenetic-analysis-software",
"display_name": "phylogenetic analysis software",
"score": 0.7480000257492065
},
{
"id": "https://openalex.org/keywords/graphical-user-interface",
"display_name": "graphical user interface",
"score": 0.699999988079071
},
{
"id": "https://openalex.org/keywords/command-line-interface",
"display_name": "command-line interface",
"score": 0.8149999976158142
}
],
"concepts": [
{
"id": "https://openalex.org/C2781078984",
"wikidata": "https://www.wikidata.org/wiki/Q107205",
"display_name": "Mega-",
"level": 2,
"score": 0.954684853553772
},
{
"id": "https://openalex.org/C149810388",
"wikidata": "https://www.wikidata.org/wiki/Q5374873",
"display_name": "Emulation",
"level": 2,
"score": 0.7341845035552979
},
{
"id": "https://openalex.org/C86803240",
"wikidata": "https://www.wikidata.org/wiki/Q420",
"display_name": "Biology",
"level": 0,
"score": 0.7123891115188599
},
{
"id": "https://openalex.org/C2777904410",
"wikidata": "https://www.wikidata.org/wiki/Q7397",
"display_name": "Software",
"level": 2,
"score": 0.6246368288993835
},
{
"id": "https://openalex.org/C513985346",
"wikidata": "https://www.wikidata.org/wiki/Q270471",
"display_name": "Virtualization",
"level": 3,
"score": 0.5699940919876099
},
{
"id": "https://openalex.org/C70343354",
"wikidata": "https://www.wikidata.org/wiki/Q3381973",
"display_name": "Phylogenomics",
"level": 5,
"score": 0.5189033150672913
},
{
"id": "https://openalex.org/C111919701",
"wikidata": "https://www.wikidata.org/wiki/Q9135",
"display_name": "Operating system",
"level": 1,
"score": 0.45067527890205383
},
{
"id": "https://openalex.org/C515153823",
"wikidata": "https://www.wikidata.org/wiki/Q14116",
"display_name": "OS X",
"level": 3,
"score": 0.41936415433883667
},
{
"id": "https://openalex.org/C41008148",
"wikidata": "https://www.wikidata.org/wiki/Q21198",
"display_name": "Computer science",
"level": 0,
"score": 0.39244985580444336
},
{
"id": "https://openalex.org/C70721500",
"wikidata": "https://www.wikidata.org/wiki/Q177005",
"display_name": "Computational biology",
"level": 1,
"score": 0.34846800565719604
},
{
"id": "https://openalex.org/C193252679",
"wikidata": "https://www.wikidata.org/wiki/Q242125",
"display_name": "Phylogenetic tree",
"level": 3,
"score": 0.27822941541671753
},
{
"id": "https://openalex.org/C54355233",
"wikidata": "https://www.wikidata.org/wiki/Q7162",
"display_name": "Genetics",
"level": 1,
"score": 0.18265393376350403
},
{
"id": "https://openalex.org/C79974875",
"wikidata": "https://www.wikidata.org/wiki/Q483639",
"display_name": "Cloud computing",
"level": 2,
"score": 0.15253958106040955
},
{
"id": "https://openalex.org/C44465124",
"wikidata": "https://www.wikidata.org/wiki/Q713623",
"display_name": "Clade",
"level": 4,
"score": 0.07831022143363953
},
{
"id": "https://openalex.org/C104317684",
"wikidata": "https://www.wikidata.org/wiki/Q7187",
"display_name": "Gene",
"level": 2,
"score": 0
},
{
"id": "https://openalex.org/C1276947",
"wikidata": "https://www.wikidata.org/wiki/Q333",
"display_name": "Astronomy",
"level": 1,
"score": 0
},
{
"id": "https://openalex.org/C50522688",
"wikidata": "https://www.wikidata.org/wiki/Q189833",
"display_name": "Economic growth",
"level": 1,
"score": 0
},
{
"id": "https://openalex.org/C121332964",
"wikidata": "https://www.wikidata.org/wiki/Q413",
"display_name": "Physics",
"level": 0,
"score": 0
},
{
"id": "https://openalex.org/C162324750",
"wikidata": "https://www.wikidata.org/wiki/Q8134",
"display_name": "Economics",
"level": 0,
"score": 0
}
],
"mesh": [
{
"descriptor_ui": "D005821",
"descriptor_name": "Genetic Techniques",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": true
},
{
"descriptor_ui": "D005821",
"descriptor_name": "Genetic Techniques",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": true
},
{
"descriptor_ui": "D005821",
"descriptor_name": "Genetic Techniques",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": true
},
{
"descriptor_ui": "D010802",
"descriptor_name": "Phylogeny",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": false
},
{
"descriptor_ui": "D010802",
"descriptor_name": "Phylogeny",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": false
},
{
"descriptor_ui": "D010802",
"descriptor_name": "Phylogeny",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": false
},
{
"descriptor_ui": "D012984",
"descriptor_name": "Software",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": true
},
{
"descriptor_ui": "D012984",
"descriptor_name": "Software",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": true
},
{
"descriptor_ui": "D012984",
"descriptor_name": "Software",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": true
},
{
"descriptor_ui": "D019143",
"descriptor_name": "Evolution, Molecular",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": true
},
{
"descriptor_ui": "D019143",
"descriptor_name": "Evolution, Molecular",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": true
},
{
"descriptor_ui": "D019143",
"descriptor_name": "Evolution, Molecular",
"qualifier_ui": null,
"qualifier_name": null,
"is_major_topic": true
}
],
"locations_count": 4,
"locations": [
{
"id": "doi:10.1093/molbev/msy096",
"doi": "https://doi.org/10.1093/molbev/msy096",
"is_oa": true,
"landing_page_url": "https://doi.org/10.1093/molbev/msy096",
"pdf_url": "https://academic.oup.com/mbe/article-pdf/35/6/1547/25091958/msy096.pdf",
"source": {
"id": "https://openalex.org/S57552105",
"display_name": "Molecular Biology and Evolution",
"issn_l": "0737-4038",
"issn": [
"0737-4038",
"1537-1719"
],
"is_oa": false,
"is_in_doaj": true,
"is_core": true,
"listed_in": [
"anvur-scientific",
"cwts-core",
"doaj",
"dongbi-a",
"jufo-3",
"ki-jl-2",
"medline",
"norway-2",
"poland-200",
"russia-white-list-1"
],
"host_organization": "https://openalex.org/P4310311648",
"host_organization_name": "Oxford University Press",
"host_organization_lineage": [
"https://openalex.org/P4310311648",
"https://openalex.org/P4310311647"
],
"host_organization_lineage_names": [
"Oxford University Press",
"University of Oxford"
],
"type": "journal"
},
"license": null,
"license_id": null,
"version": "publishedVersion",
"is_accepted": true,
"is_published": true,
"raw_source_name": "Molecular Biology and Evolution",
"raw_type": "journal-article"
},
{
"id": "pmid:29722887",
"doi": null,
"is_oa": false,
"landing_page_url": "https://pubmed.ncbi.nlm.nih.gov/29722887",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S4306525036",
"display_name": "PubMed",
"issn_l": null,
"issn": null,
"is_oa": false,
"is_in_doaj": false,
"is_core": false,
"listed_in": [],
"host_organization": "https://openalex.org/I1299303238",
"host_organization_name": "National Institutes of Health",
"host_organization_lineage": [
"https://openalex.org/I1299303238"
],
"host_organization_lineage_names": [],
"type": "repository"
},
"license": null,
"license_id": null,
"version": "publishedVersion",
"is_accepted": true,
"is_published": true,
"raw_source_name": "Molecular biology and evolution",
"raw_type": "Evaluation Study"
},
{
"id": "pmh:oai:europepmc.org:5511388",
"doi": null,
"is_oa": false,
"landing_page_url": "https://www.ncbi.nlm.nih.gov/pmc/articles/5967553",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S4306400806",
"display_name": "Europe PMC (PubMed Central)",
"issn_l": null,
"issn": null,
"is_oa": false,
"is_in_doaj": false,
"is_core": false,
"listed_in": [],
"host_organization": "https://openalex.org/I1303153112",
"host_organization_name": "European Bioinformatics Institute",
"host_organization_lineage": [
"https://openalex.org/I1303153112"
],
"host_organization_lineage_names": [],
"type": "repository"
},
"license": null,
"license_id": null,
"version": "submittedVersion",
"is_accepted": false,
"is_published": false,
"raw_source_name": null,
"raw_type": "Text"
},
{
"id": "pmh:oai:pubmedcentral.nih.gov:5967553",
"doi": null,
"is_oa": true,
"landing_page_url": "https://www.ncbi.nlm.nih.gov/pmc/articles/5967553",
"pdf_url": null,
"source": {
"id": "https://openalex.org/S2764455111",
"display_name": "PubMed Central",
"issn_l": null,
"issn": null,
"is_oa": true,
"is_in_doaj": false,
"is_core": false,
"listed_in": [],
"host_organization": "https://openalex.org/I1299303238",
"host_organization_name": "National Institutes of Health",
"host_organization_lineage": [
"https://openalex.org/I1299303238"
],
"host_organization_lineage_names": [],
"type": "repository"
},
"license": null,
"license_id": null,
"version": "submittedVersion",
"is_accepted": false,
"is_published": false,
"raw_source_name": "Mol Biol Evol",
"raw_type": "Text"
}
],
"best_oa_location": {
"id": "doi:10.1093/molbev/msy096",
"doi": "https://doi.org/10.1093/molbev/msy096",
"is_oa": true,
"landing_page_url": "https://doi.org/10.1093/molbev/msy096",
"pdf_url": "https://academic.oup.com/mbe/article-pdf/35/6/1547/25091958/msy096.pdf",
"source": {
"id": "https://openalex.org/S57552105",
"display_name": "Molecular Biology and Evolution",
"issn_l": "0737-4038",
"issn": [
"0737-4038",
"1537-1719"
],
"is_oa": false,
"is_in_doaj": true,
"is_core": true,
"listed_in": [
"anvur-scientific",
"cwts-core",
"doaj",
"dongbi-a",
"jufo-3",
"ki-jl-2",
"medline",
"norway-2",
"poland-200",
"russia-white-list-1"
],
"host_organization": "https://openalex.org/P4310311648",
"host_organization_name": "Oxford University Press",
"host_organization_lineage": [
"https://openalex.org/P4310311648",
"https://openalex.org/P4310311647"
],
"host_organization_lineage_names": [
"Oxford University Press",
"University of Oxford"
],
"type": "journal"
},
"license": null,
"license_id": null,
"version": "publishedVersion",
"is_accepted": true,
"is_published": true,
"raw_source_name": "Molecular Biology and Evolution",
"raw_type": "journal-article"
},
"sustainable_development_goals": [],
"sustainable_development_goals_aurora": [],
"study_designs": [],
"awards": [
{
"id": "https://openalex.org/G1297753613",
"display_name": "ABI Development: Open-source, extensible, and cross-platform MEGA",
"funder_award_id": "1661218",
"funder_id": "https://openalex.org/F4320306076",
"funder_display_name": "National Science Foundation"
},
{
"id": "https://openalex.org/G6997571547",
"display_name": null,
"funder_award_id": "R01 GM126567",
"funder_id": "https://openalex.org/F4320337354",
"funder_display_name": "National Institute of General Medical Sciences"
},
{
"id": "https://openalex.org/G7655441514",
"display_name": "EVOLUTIONARY BIOINFORMATICS OF TUMOR PROFILES",
"funder_award_id": "R01LM012487",
"funder_id": "https://openalex.org/F4320337372",
"funder_display_name": "U.S. National Library of Medicine"
},
{
"id": "https://openalex.org/G9000164247",
"display_name": null,
"funder_award_id": "R01GM126567",
"funder_id": "https://openalex.org/F4320332161",
"funder_display_name": "National Institutes of Health"
},
{
"id": "https://openalex.org/G9000315096",
"display_name": null,
"funder_award_id": "R01GM126567-01",
"funder_id": "https://openalex.org/F4320332161",
"funder_display_name": "National Institutes of Health"
}
],
"funders": [
{
"id": "https://openalex.org/F4320306076",
"display_name": "National Science Foundation",
"ror": "https://ror.org/021nxhr62"
},
{
"id": "https://openalex.org/F4320332161",
"display_name": "National Institutes of Health",
"ror": "https://ror.org/01cwqze88"
},
{
"id": "https://openalex.org/F4320334764",
"display_name": "Japan Society for the Promotion of Science",
"ror": "https://ror.org/00hhkn466"
},
{
"id": "https://openalex.org/F4320337354",
"display_name": "National Institute of General Medical Sciences",
"ror": "https://ror.org/04q48ey07"
},
{
"id": "https://openalex.org/F4320337372",
"display_name": "U.S. National Library of Medicine",
"ror": "https://ror.org/0060t0j89"
}
],
"has_content": {
"grobid_xml": true,
"pdf": true
},
"content_urls": {
"pdf": "https://content.openalex.org/works/W2799524357.pdf",
"grobid_xml": "https://content.openalex.org/works/W2799524357.grobid-xml"
},
"referenced_works_count": 4,
"referenced_works": [
"https://openalex.org/W2097403532",
"https://openalex.org/W2121552166",
"https://openalex.org/W2156434383",
"https://openalex.org/W2311203695"
],
"related_works": [
"https://openalex.org/W2380915035",
"https://openalex.org/W2154523322",
"https://openalex.org/W2083200807",
"https://openalex.org/W4402810557",
"https://openalex.org/W4385584191",
"https://openalex.org/W1603137082",
"https://openalex.org/W2364195017",
"https://openalex.org/W3112226121",
"https://openalex.org/W2355430452",
"https://openalex.org/W1951195060"
],
"counts_by_year": [
{
"year": 2026,
"cited_by_count": 2390
},
{
"year": 2025,
"cited_by_count": 3951
},
{
"year": 2024,
"cited_by_count": 5002
},
{
"year": 2023,
"cited_by_count": 5723
},
{
"year": 2022,
"cited_by_count": 7117
},
{
"year": 2021,
"cited_by_count": 7171
},
{
"year": 2020,
"cited_by_count": 4506
},
{
"year": 2019,
"cited_by_count": 1563
},
{
"year": 2018,
"cited_by_count": 133
},
{
"year": 2017,
"cited_by_count": 1
},
{
"year": 2015,
"cited_by_count": 1
},
{
"year": 2014,
"cited_by_count": 1
},
{
"year": 2013,
"cited_by_count": 1
},
{
"year": 2012,
"cited_by_count": 4
}
],
"updated_date": "2026-10-23T09:35:12.469056",
"created_date": "2025-10-10T00:00:00"
}